As a security nut myself, and also a Linux admin, one of my biggest pet peeves is when I've taken the time and care to segment all the users on a server into separate home directories, and then some developer comes along, logs in as root, and changes the ownership of files. Other things can cause this, like Apache, PHP, Mutt, etc.. So I've always used a cron job that executes daily (and on demand) which automatically fixes all the permissions back to what they should be.

Linux